Resolving Property Conflicts
A property conflict is reported during synchronization with the server when PhpStorm detects differences between the properties of a local file or folder and their server version. PhpStorm does not attempt to resolve property conflicts automatically, and displays the conflicting files and folders under the Merged with property conflicts node in the Update Info tab of the Version Control tool window Alt+9. You have to resolve property conflicts manually and then tell PhpStorm to treat the corresponding files and folders as conflict-free.
Resolve a property conflict
Open the Version Control tool window Alt+9 and switch to the Repository tab.
In the Changed Files pane, select the conflicting file.
Choose Properties Diff from the context menu of the selection, or click on the toolbar.
Explore the differences in the Subversion properties difference viewer:
Update the properties so the conflict is resolved.
To mark a file as resolved
In the Update Info tab of the Version Control tool window Alt+9, select the fixed file under the Merged with property conflicts node. As you can see, the file is still displayed in red as conflicting.
From the context menu of the selection, choose Subversion, and then choose Mark Resolved.
Check in the resolved files.